WormBase Tree Display for Variation: WBVar01513795
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WBVar01513795 | Name | Public_name | WBVar01513795 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00036013 | |||||||
CE48894:p.Lys32= | ||||||||
Y54G2A.6a.1:c.-151-1325C>T | ||||||||
Y54G2A.49b.1:c.96G>A | ||||||||
HGVSg | CHROMOSOME_IV:g.2852914C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CGTGTCCAGAGACGTGCTCGTTTTTTTCTT | TTTGATTTGCAGATTATAATAATTGGTAAT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2852912 | 2852912 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021872 | ||||||
WBGene00044492 | ||||||||
Transcript | Y54G2A.49b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.49b.1:c.96G>A | |||||||
HGVSp | CE48894:p.Lys32= | |||||||
cDNA_position | 99 | |||||||
CDS_position | 96 | |||||||
Protein_position | 32 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Y54G2A.6a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.6a.1:c.-151-1325C>T | |||||||
Intron_number | 1/6 | |||||||
Method | WGS_Flibotte |