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WormBase Tree Display for Variation: WBVar01513891

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Name Class

WBVar01513891NamePublic_nameWBVar01513891
Other_namecewivar00036125
Y54G2A.17b.1:c.1440A>C
CE46281:p.Arg480=
CE46116:p.Arg460=
Y54G2A.17a.1:c.1380A>C
Y54G2A.17a.2:c.1380A>C
Y54G2A.17a.3:c.1380A>C
HGVSgCHROMOSOME_IV:g.2873400T>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCTTAATGATTTTATTCGCGTTCACCAGAGCCGTTTGGATTCCTGAAAAAAAATTGGAAAT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28733982873398From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.17a.3:c.1380A>C
HGVSpCE46116:p.Arg460=
cDNA_position1425
CDS_position1380
Protein_position460
Exon_number6/8
Codon_changecgA/cgC
Amino_acid_changeR
Y54G2A.17b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.17b.1:c.1440A>C
HGVSpCE46281:p.Arg480=
cDNA_position1476
CDS_position1440
Protein_position480
Exon_number7/8
Codon_changecgA/cgC
Amino_acid_changeR
Y54G2A.17a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.17a.2:c.1380A>C
HGVSpCE46116:p.Arg460=
cDNA_position1521
CDS_position1380
Protein_position460
Exon_number7/9
Codon_changecgA/cgC
Amino_acid_changeR
Y54G2A.17a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.17a.1:c.1380A>C
HGVSpCE46116:p.Arg460=
cDNA_position1470
CDS_position1380
Protein_position460
Exon_number7/9
Codon_changecgA/cgC
Amino_acid_changeR
MethodWGS_Flibotte