WormBase Tree Display for Variation: WBVar01513891
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WBVar01513891 | Name | Public_name | WBVar01513891 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00036125 | |||||||
Y54G2A.17b.1:c.1440A>C | ||||||||
CE46281:p.Arg480= | ||||||||
CE46116:p.Arg460= | ||||||||
Y54G2A.17a.1:c.1380A>C | ||||||||
Y54G2A.17a.2:c.1380A>C | ||||||||
Y54G2A.17a.3:c.1380A>C | ||||||||
HGVSg | CHROMOSOME_IV:g.2873400T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CTTAATGATTTTATTCGCGTTCACCAGAGC | CGTTTGGATTCCTGAAAAAAAATTGGAAAT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2873398 | 2873398 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.3:c.1380A>C | |||||||
HGVSp | CE46116:p.Arg460= | |||||||
cDNA_position | 1425 | |||||||
CDS_position | 1380 | |||||||
Protein_position | 460 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | cgA/cgC | |||||||
Amino_acid_change | R | |||||||
Y54G2A.17b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17b.1:c.1440A>C | |||||||
HGVSp | CE46281:p.Arg480= | |||||||
cDNA_position | 1476 | |||||||
CDS_position | 1440 | |||||||
Protein_position | 480 | |||||||
Exon_number | 7/8 | |||||||
Codon_change | cgA/cgC | |||||||
Amino_acid_change | R | |||||||
Y54G2A.17a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.2:c.1380A>C | |||||||
HGVSp | CE46116:p.Arg460= | |||||||
cDNA_position | 1521 | |||||||
CDS_position | 1380 | |||||||
Protein_position | 460 | |||||||
Exon_number | 7/9 | |||||||
Codon_change | cgA/cgC | |||||||
Amino_acid_change | R | |||||||
Y54G2A.17a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.1:c.1380A>C | |||||||
HGVSp | CE46116:p.Arg460= | |||||||
cDNA_position | 1470 | |||||||
CDS_position | 1380 | |||||||
Protein_position | 460 | |||||||
Exon_number | 7/9 | |||||||
Codon_change | cgA/cgC | |||||||
Amino_acid_change | R | |||||||
Method | WGS_Flibotte |