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WormBase Tree Display for Variation: WBVar01513970

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Name Class

WBVar01513970NamePublic_nameWBVar01513970
Other_namecewivar00036206
CE46281:p.Ser2Ala
Y54G2A.17b.1:c.4T>G
Y54G2A.17a.2:c.-57T>G
Y54G2A.17a.1:c.-38-2912T>G
HGVSgCHROMOSOME_IV:g.2885253A>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGAAAAAACGAACCTGATGGCAAAATGAACGCATTCTTTTTTCTGAGTGAGGGTGTTCTGG
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28852512885251From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17b.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScY54G2A.17b.1:c.4T>G
HGVSpCE46281:p.Ser2Ala
cDNA_position40
CDS_position4
Protein_position2
Exon_number2/8
Codon_changeTcg/Gcg
Amino_acid_changeS/A
Y54G2A.17a.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.-57T>G
cDNA_position85
Exon_number1/9
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-38-2912T>G
Intron_number1/8
MethodWGS_Flibotte