WormBase Tree Display for Variation: WBVar01513970
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WBVar01513970 | Name | Public_name | WBVar01513970 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00036206 | |||||||
CE46281:p.Ser2Ala | ||||||||
Y54G2A.17b.1:c.4T>G | ||||||||
Y54G2A.17a.2:c.-57T>G | ||||||||
Y54G2A.17a.1:c.-38-2912T>G | ||||||||
HGVSg | CHROMOSOME_IV:g.2885253A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | GAAAAAACGAACCTGATGGCAAAATGAACG | CATTCTTTTTTCTGAGTGAGGGTGTTCTGG | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2885251 | 2885251 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (12) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17b.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54G2A.17b.1:c.4T>G | |||||||
HGVSp | CE46281:p.Ser2Ala | |||||||
cDNA_position | 40 | |||||||
CDS_position | 4 | |||||||
Protein_position | 2 | |||||||
Exon_number | 2/8 | |||||||
Codon_change | Tcg/Gcg | |||||||
Amino_acid_change | S/A | |||||||
Y54G2A.17a.2 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.-57T>G | |||||||
cDNA_position | 85 | |||||||
Exon_number | 1/9 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.-38-2912T>G | |||||||
Intron_number | 1/8 | |||||||
Method | WGS_Flibotte |