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WormBase Tree Display for Variation: WBVar01514008

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Name Class

WBVar01514008NamePublic_nameWBVar01514008
Other_namecewivar00036256
Y54G2A.36.3:c.-283-1475G>C
Y54G2A.36.5:c.-1758G>C
Y54G2A.36.2:c.-294-1464G>C
Y54G2A.20:n.739C>G
Y54G2A.36.1:c.-320-1438G>C
Y54G2A.36.4:c.-248-1464G>C
HGVSgCHROMOSOME_IV:g.2899435G>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesATTCCAAATCGTCCCTATCCAACTGTTCCTGTTCAAATTCAACGAATTTCTTAGATTTCT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28994332899433From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (25)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021898
WBGene00021885
TranscriptY54G2A.36.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.36.2:c.-294-1464G>C
Intron_number1/4
Y54G2A.36.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.36.1:c.-320-1438G>C
Intron_number1/4
Y54G2A.36.5VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.36.5:c.-1758G>C
cDNA_position1332
Exon_number1/4
Y54G2A.36.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.36.4:c.-248-1464G>C
Intron_number1/5
Y54G2A.36.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.36.3:c.-283-1475G>C
Intron_number1/4
PseudogeneY54G2A.20VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScY54G2A.20:n.739C>G
cDNA_position739
Exon_number4/14
MethodWGS_Flibotte