WormBase Tree Display for Variation: WBVar01567388
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WBVar01567388 | Name | Public_name | WBVar01567388 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (11) | ||||||||
HGVSg | CHROMOSOME_III:g.10526867C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | ||||
Flanking_sequences | GGCTGCTTCTTGAAATGCAAAGCAGATAAG | GCACCTAAGAGCACCGTAGTTCAAGATTAC | ||||||
Mapping_target | T21C12 | |||||||
Source_location | 225 | CHROMOSOME_III | 10526769 | 10526769 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006784 | ||||||
Transcript | T21C12.1l.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1l.1:c.440-54C>T | |||||||
Intron_number | 4/8 | |||||||
T21C12.1k.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1k.1:c.563-1103C>T | |||||||
Intron_number | 5/11 | |||||||
T21C12.1m.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1m.1:c.59-1103C>T | |||||||
Intron_number | 1/8 | |||||||
T21C12.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1c.1:c.563-1103C>T | |||||||
Intron_number | 6/18 | |||||||
T21C12.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1e.1:c.563-1103C>T | |||||||
Intron_number | 6/19 | |||||||
T21C12.1c.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1c.2:c.563-1103C>T | |||||||
Intron_number | 6/14 | |||||||
T21C12.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1b.1:c.944-54C>T | |||||||
Intron_number | 9/14 | |||||||
T21C12.1o.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1o.1:c.58+2542C>T | |||||||
Intron_number | 1/5 | |||||||
T21C12.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1d.1:c.563-1103C>T | |||||||
Intron_number | 6/17 | |||||||
T21C12.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1f.1:c.562+2542C>T | |||||||
Intron_number | 6/11 | |||||||
Method | WGS_Flibotte |