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WormBase Tree Display for Variation: WBVar01568555

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Name Class

WBVar01568555NamePublic_nameWBVar01568555
Other_namecewivar00154318
Y54G2A.11b.2:c.-15-399G>A
Y54G2A.11a.1:c.1210-399G>A
Y54G2A.11b.3:c.-15-399G>A
Y54G2A.11b.1:c.-414G>A
HGVSgCHROMOSOME_IV:g.2766923C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTAAATCTAAAAATAAAATTTGAAATTCCTTTAAAATTTTAGACAAAAATTATATTTTTTC
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV27669212766921From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021876
TranscriptY54G2A.11b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.3:c.-15-399G>A
Intron_number2/5
Y54G2A.11b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.1:c.-414G>A
cDNA_position2508
Exon_number4/7
Y54G2A.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11a.1:c.1210-399G>A
Intron_number5/7
Y54G2A.11b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.2:c.-15-399G>A
Intron_number3/6
MethodWGS_Flibotte