WormBase Tree Display for Variation: WBVar01571406
expand all nodes | collapse all nodes | view schema
WBVar01571406 | Name | Public_name | WBVar01571406 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00157783 | |||||||
F17E5.1a.1:c.1387-200C>T | ||||||||
F17E5.1b.1:c.364-200C>T | ||||||||
HGVSg | CHROMOSOME_X:g.12403060G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F17E5 | ||||
Flanking_sequences | TTGAACTTTCAACTAACAACTTTTCCTGGC | GTTTTAGAGCAGCGTGTATAGTTTGCATTG | ||||||
Mapping_target | F17E5 | |||||||
Source_location | 225 | CHROMOSOME_X | 12402992 | 12402992 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002991 | ||||||
Transcript | F17E5.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F17E5.1a.1:c.1387-200C>T | |||||||
Intron_number | 14/25 | |||||||
F17E5.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F17E5.1b.1:c.364-200C>T | |||||||
Intron_number | 3/14 | |||||||
Method | WGS_Flibotte |