WormBase Tree Display for Variation: WBVar01571415
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WBVar01571415 | Name | Public_name | WBVar01571415 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00157794 | |||||||
CE27131:p.Lys172= | ||||||||
F17E5.1a.1:c.516A>G | ||||||||
HGVSg | CHROMOSOME_X:g.12411321T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F17E5 | ||||
Flanking_sequences | AGCCATTGAACCACCAATTTCAGACAAATC | TTTGCAACTCCAAATCCACACAGTTTCAGT | ||||||
Mapping_target | F17E5 | |||||||
Source_location | 225 | CHROMOSOME_X | 12411253 | 12411253 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002991 | ||||||
Transcript | F17E5.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F17E5.1a.1:c.516A>G | |||||||
HGVSp | CE27131:p.Lys172= | |||||||
cDNA_position | 532 | |||||||
CDS_position | 516 | |||||||
Protein_position | 172 | |||||||
Exon_number | 6/26 | |||||||
Codon_change | aaA/aaG | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |