WormBase Tree Display for Variation: WBVar01572600
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WBVar01572600 | Name | Public_name | WBVar01572600 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00159166 | |||||||
CE27761:p.Ile524= | ||||||||
F54B11.3a.1:c.1572C>T | ||||||||
F54B11.3b.1:c.1572C>T | ||||||||
CE28236:p.Ile524= | ||||||||
HGVSg | CHROMOSOME_X:g.13586956C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F54B11 | ||||
Flanking_sequences | CGGTCTACTTCTGGCTCTTCTCTTCGCCAT | TTTCTCCTTGGATTCCTGACATCTGACAAC | ||||||
Mapping_target | F54B11 | |||||||
Source_location | 225 | CHROMOSOME_X | 13586886 | 13586886 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006816 | ||||||
Transcript | F54B11.3a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F54B11.3a.1:c.1572C>T | |||||||
HGVSp | CE28236:p.Ile524= | |||||||
cDNA_position | 1577 | |||||||
CDS_position | 1572 | |||||||
Protein_position | 524 | |||||||
Exon_number | 5/12 | |||||||
Codon_change | atC/atT | |||||||
Amino_acid_change | I | |||||||
F54B11.3b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F54B11.3b.1:c.1572C>T | |||||||
HGVSp | CE27761:p.Ile524= | |||||||
cDNA_position | 1577 | |||||||
CDS_position | 1572 | |||||||
Protein_position | 524 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | atC/atT | |||||||
Amino_acid_change | I | |||||||
Method | WGS_Flibotte |