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WormBase Tree Display for Variation: WBVar01580492

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Name Class

WBVar01580492NamePublic_nameWBVar01580492
Other_namecewivar00203443
CE48649:p.Tyr66=
CE27494:p.Tyr165=
Y54G2A.6a.1:c.495C>T
Y54G2A.6b.1:c.198C>T
HGVSgCHROMOSOME_IV:g.2855072C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCTATGGATCGACTGGCTACCCGGTGTCTTACCAGTCTCCGGAGCAACAGAATACCCAGCT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28550702855070From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021872
TranscriptY54G2A.6b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.6b.1:c.198C>T
HGVSpCE48649:p.Tyr66=
cDNA_position198
CDS_position198
Protein_position66
Exon_number2/2
Codon_changetaC/taT
Amino_acid_changeY
Y54G2A.6a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.6a.1:c.495C>T
HGVSpCE27494:p.Tyr165=
cDNA_position1050
CDS_position495
Protein_position165
Exon_number6/7
Codon_changetaC/taT
Amino_acid_changeY
MethodWGS_Flibotte