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WormBase Tree Display for Variation: WBVar01580495

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Name Class

WBVar01580495NamePublic_nameWBVar01580495
Other_namecewivar00203446
Y54G2A.6a.1:c.645C>T
Y54G2A.6b.1:c.348C>T
CE27494:p.Ala215=
CE48649:p.Ala116=
HGVSgCHROMOSOME_IV:g.2855222C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTCCTGTCTCTGGGGCTACCGGCTATCCAGCTCTTCCATGACCGACTCACCGGCTTCTGGA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28552202855220From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021872
TranscriptY54G2A.6b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.6b.1:c.348C>T
HGVSpCE48649:p.Ala116=
cDNA_position348
CDS_position348
Protein_position116
Exon_number2/2
Codon_changegcC/gcT
Amino_acid_changeA
Y54G2A.6a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.6a.1:c.645C>T
HGVSpCE27494:p.Ala215=
cDNA_position1200
CDS_position645
Protein_position215
Exon_number6/7
Codon_changegcC/gcT
Amino_acid_changeA
MethodWGS_Flibotte