WormBase Tree Display for Variation: WBVar01580495
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WBVar01580495 | Name | Public_name | WBVar01580495 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00203446 | |||||||
Y54G2A.6a.1:c.645C>T | ||||||||
Y54G2A.6b.1:c.348C>T | ||||||||
CE27494:p.Ala215= | ||||||||
CE48649:p.Ala116= | ||||||||
HGVSg | CHROMOSOME_IV:g.2855222C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TCCTGTCTCTGGGGCTACCGGCTATCCAGC | TCTTCCATGACCGACTCACCGGCTTCTGGA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2855220 | 2855220 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (17) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021872 | ||||||
Transcript | Y54G2A.6b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.6b.1:c.348C>T | |||||||
HGVSp | CE48649:p.Ala116= | |||||||
cDNA_position | 348 | |||||||
CDS_position | 348 | |||||||
Protein_position | 116 | |||||||
Exon_number | 2/2 | |||||||
Codon_change | gcC/gcT | |||||||
Amino_acid_change | A | |||||||
Y54G2A.6a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.6a.1:c.645C>T | |||||||
HGVSp | CE27494:p.Ala215= | |||||||
cDNA_position | 1200 | |||||||
CDS_position | 645 | |||||||
Protein_position | 215 | |||||||
Exon_number | 6/7 | |||||||
Codon_change | gcC/gcT | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |