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WormBase Tree Display for Variation: WBVar01580540

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Name Class

WBVar01580540NamePublic_nameWBVar01580540
Other_namecewivar00203582
Y54G2A.17a.3:c.1180-1029A>G
Y54G2A.17a.2:c.1180-1029A>G
Y54G2A.17b.1:c.1240-1029A>G
Y54G2A.17a.1:c.1180-1029A>G
HGVSgCHROMOSOME_IV:g.2876412T>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCTTTTTTAGGCCCAAAATGGCCCAAAACTACAAATTTCGTAATGAGACGTTCTGAAAATTTTTCATCAAA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28764102876410From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1180-1029A>G
Intron_number4/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1240-1029A>G
Intron_number5/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1180-1029A>G
Intron_number5/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1180-1029A>G
Intron_number5/8
MethodWGS_Flibotte