WormBase Tree Display for Variation: WBVar01630118
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WBVar01630118 | Name | Public_name | WBVar01630118 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00311692 | |||||||
CE41730:p.Asp259= | ||||||||
CE49017:p.Asp141= | ||||||||
Y54G2A.45a.1:c.777T>C | ||||||||
Y54G2A.45b.1:c.423T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.2807890T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CTACTCGTTCCGTGTTGTCCACCATCACGA | ATTGTACCACATGTGCCATTGCAAAATGCA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2807888 | 2807888 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044488 | ||||||
Transcript | Y54G2A.45b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.45b.1:c.423T>C | |||||||
HGVSp | CE49017:p.Asp141= | |||||||
cDNA_position | 423 | |||||||
CDS_position | 423 | |||||||
Protein_position | 141 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | gaT/gaC | |||||||
Amino_acid_change | D | |||||||
Y54G2A.45a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.45a.1:c.777T>C | |||||||
HGVSp | CE41730:p.Asp259= | |||||||
cDNA_position | 793 | |||||||
CDS_position | 777 | |||||||
Protein_position | 259 | |||||||
Exon_number | 8/10 | |||||||
Codon_change | gaT/gaC | |||||||
Amino_acid_change | D | |||||||
Method | WGS_Flibotte |