WormBase Tree Display for Variation: WBVar01630327
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WBVar01630327 | Name | Public_name | WBVar01630327 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00311913 | |||||||
Y37E11C.1b.1:c.1356G>T | ||||||||
CE21557:p.Thr627= | ||||||||
Y37E11C.1c.1:c.888G>T | ||||||||
CE31638:p.Thr452= | ||||||||
CE31639:p.Thr296= | ||||||||
Y37E11C.1a.1:c.1881G>T | ||||||||
HGVSg | CHROMOSOME_IV:g.3523765G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | M57 | ||||
Flanking_sequences | TCCGGATCGGATGATCGGAGCACTTTCGAC | CAGCCTCTGGTGGTTTGTACGTCCGGACAT | ||||||
Mapping_target | M57 | |||||||
Source_location | 225 | CHROMOSOME_IV | 3523762 | 3523762 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006769 | ||||||
Transcript | Y37E11C.1c.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y37E11C.1c.1:c.888G>T | |||||||
HGVSp | CE31639:p.Thr296= | |||||||
cDNA_position | 888 | |||||||
CDS_position | 888 | |||||||
Protein_position | 296 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | acG/acT | |||||||
Amino_acid_change | T | |||||||
Y37E11C.1b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y37E11C.1b.1:c.1356G>T | |||||||
HGVSp | CE31638:p.Thr452= | |||||||
cDNA_position | 1356 | |||||||
CDS_position | 1356 | |||||||
Protein_position | 452 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | acG/acT | |||||||
Amino_acid_change | T | |||||||
Y37E11C.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y37E11C.1a.1:c.1881G>T | |||||||
HGVSp | CE21557:p.Thr627= | |||||||
cDNA_position | 1881 | |||||||
CDS_position | 1881 | |||||||
Protein_position | 627 | |||||||
Exon_number | 8/11 | |||||||
Codon_change | acG/acT | |||||||
Amino_acid_change | T | |||||||
Method | WGS_Flibotte |