WormBase Tree Display for Variation: WBVar01630400
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WBVar01630400 | Name | Public_name | WBVar01630400 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00311990 | |||||||
CE17307:p.Cys230= | ||||||||
ZC416.8b.1:c.1-3342T>C | ||||||||
ZC416.8a.1:c.690T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.3621117A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | ZC416 | ||||
Flanking_sequences | CACCATAAAAACTGCAATAGCATCAGCCAA | CAGACAAATGACAGAATCAGGAAAGGTACG | ||||||
Mapping_target | ZC416 | |||||||
Source_location | 225 | CHROMOSOME_IV | 3621112 | 3621112 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006756 | ||||||
WBGene00000481 | ||||||||
Transcript | ZC416.8a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | ZC416.8a.1:c.690T>C | |||||||
HGVSp | CE17307:p.Cys230= | |||||||
cDNA_position | 772 | |||||||
CDS_position | 690 | |||||||
Protein_position | 230 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | tgT/tgC | |||||||
Amino_acid_change | C | |||||||
ZC416.8b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZC416.8b.1:c.1-3342T>C | |||||||
Intron_number | 1/11 | |||||||
Method | WGS_Flibotte |