WormBase Tree Display for Variation: WBVar01642026
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WBVar01642026 | Name | Public_name | WBVar01642026 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00326978 | |||||||
C52E12.2a.1:c.599+1904A>T | ||||||||
C52E12.2a.2:c.599+1904A>T | ||||||||
C52E12.2b.1:c.599+1904A>T | ||||||||
HGVSg | CHROMOSOME_II:g.6999057A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C52E12 | ||||
Flanking_sequences | TGATAAATATTTGATAATATTTGAAAAAAA | TTTTTTTTGATTTTTTCGAAAAGAAAATTC | ||||||
Mapping_target | C52E12 | |||||||
Source_location | 225 | CHROMOSOME_II | 6999015 | 6999015 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006831 | ||||||
Transcript | C52E12.2a.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C52E12.2a.2:c.599+1904A>T | |||||||
Intron_number | 5/23 | |||||||
C52E12.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C52E12.2b.1:c.599+1904A>T | |||||||
Intron_number | 5/24 | |||||||
C52E12.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C52E12.2a.1:c.599+1904A>T | |||||||
Intron_number | 5/23 | |||||||
Method | WGS_Flibotte |