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WormBase Tree Display for Variation: WBVar01677906

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Name Class

WBVar01677906NamePublic_nameWBVar01677906
Other_name (11)
HGVSgCHROMOSOME_V:g.4500037A>T
Sequence_detailsSMapS_parentSequenceT28F12
Flanking_sequencesCGCTTTCTAGATCTCAAAATTGCAATTTTTGGTGTTCGCCTTGTTTTAAGCGCTGGTTAG
Mapping_targetT28F12
Source_location225CHROMOSOME_V45000234500023From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006796
TranscriptT28F12.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2e.1:c.12+230A>T
Intron_number1/9
T28F12.2d.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2d.4:c.-1225+230A>T
Intron_number1/11
T28F12.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2d.1:c.-1224-1182A>T
Intron_number1/11
T28F12.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2a.1:c.124-1182A>T
Intron_number2/11
T28F12.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2b.1:c.12+230A>T
Intron_number2/11
T28F12.2d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2d.2:c.-1242-1182A>T
Intron_number1/11
T28F12.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2c.1:c.-1806-1182A>T
Intron_number1/10
T28F12.2d.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2d.3:c.-1243+230A>T
Intron_number1/11
T28F12.2c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2c.2:c.-1423+230A>T
Intron_number1/10
T28F12.2f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT28F12.2f.1:c.124-1182A>T
Intron_number2/10
MethodWGS_Flibotte