WormBase Tree Display for Variation: WBVar01687898
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WBVar01687898 | Name | Public_name | WBVar01687898 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00379801 | |||||||
Y54G2A.38.1:c.340G>T | ||||||||
CE48977:p.Ala114Ser | ||||||||
HGVSg | CHROMOSOME_IV:g.2760634G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TATTTTCAATATTTTATGGTCACTTTGATG | CTGTCAACAGGACAACTTCCATATTTTTCT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2760632 | 2760632 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00043061 | ||||||
Transcript | Y54G2A.38.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54G2A.38.1:c.340G>T | |||||||
HGVSp | CE48977:p.Ala114Ser | |||||||
cDNA_position | 340 | |||||||
CDS_position | 340 | |||||||
Protein_position | 114 | |||||||
Exon_number | 2/6 | |||||||
Codon_change | Gct/Tct | |||||||
Amino_acid_change | A/S | |||||||
Method | WGS_Flibotte |