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WormBase Tree Display for Variation: WBVar01692506

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Name Class

WBVar01692506NamePublic_nameWBVar01692506
Other_namecewivar00388437
Y54G2A.17b.1:c.22+1039C>T
Y54G2A.17a.2:c.-39+1039C>T
Y54G2A.17a.1:c.-38-1855C>T
HGVSgCHROMOSOME_IV:g.2884196G>A
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGTCTCTGGCTTCCCTCATAAATTGAAATGGAAGAGTTTTTGCCGAACTAGCCATTTTGGCTCGGCCATATCTGGGGTAGATTTACGGCGCGTTGCGTGTCGCGTCGCGGCTCGGCGGTTC
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28841942884194From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.22+1039C>T
Intron_number2/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.-39+1039C>T
Intron_number1/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-38-1855C>T
Intron_number1/8
MethodWGS_Flibotte