WormBase Tree Display for Variation: WBVar01692506
expand all nodes | collapse all nodes | view schema
WBVar01692506 | Name | Public_name | WBVar01692506 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00388437 | |||||||
Y54G2A.17b.1:c.22+1039C>T | ||||||||
Y54G2A.17a.2:c.-39+1039C>T | ||||||||
Y54G2A.17a.1:c.-38-1855C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2884196G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | GTCTCTGGCTTCCCTCATAAATTGAAATGGAAGAGTTTTTGCCGAACTAG | CCATTTTGGCTCGGCCATATCTGGGGTAGATTTACGGCGCGTTGCGTGTCGCGTCGCGGCTCGGCGGTTC | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2884194 | 2884194 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17b.1:c.22+1039C>T | |||||||
Intron_number | 2/7 | |||||||
Y54G2A.17a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.-39+1039C>T | |||||||
Intron_number | 1/8 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.-38-1855C>T | |||||||
Intron_number | 1/8 | |||||||
Method | WGS_Flibotte |