WormBase Tree Display for Variation: WBVar01726516
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WBVar01726516 | Name | Public_name | WBVar01726516 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00424888 | |||||||
Y54G2A.12.1:c.186A>G | ||||||||
CE41063:p.Ser62= | ||||||||
HGVSg | CHROMOSOME_IV:g.2782639T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TGGCTTGAAGAGCTGATCAAATTTTGGATT | GATTTAATCTCTTTAGTCTTTGGATCGACA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2782637 | 2782637 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021877 | ||||||
Transcript | Y54G2A.12.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.12.1:c.186A>G | |||||||
HGVSp | CE41063:p.Ser62= | |||||||
cDNA_position | 205 | |||||||
CDS_position | 186 | |||||||
Protein_position | 62 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | tcA/tcG | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |