WormBase Tree Display for Variation: WBVar01726648
expand all nodes | collapse all nodes | view schema
WBVar01726648 | Name | Public_name | WBVar01726648 | ||
---|---|---|---|---|---|
Other_name | cewivar00425025 | ||||
Y54G2A.36.1:c.-321+465C>T | |||||
Y54G2A.20:n.1572G>A | |||||
Y54G2A.36.4:c.-249+465C>T | |||||
Y54G2A.36.3:c.-284+465C>T | |||||
Y54G2A.36.2:c.-295+465C>T | |||||
Y54G2A.36.5:c.-2926C>T | |||||
HGVSg | CHROMOSOME_IV:g.2898267C>T | ||||
Sequence_details (6) | |||||
Variation_type | Natural_variant | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | VC | ||||
Analysis | Million_mutation_project_reanalysis | ||||
Status | Live | ||||
Affects | Gene | WBGene00021898 | |||
WBGene00021885 | |||||
Transcript | Y54G2A.36.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.2:c.-295+465C>T | ||||
Intron_number | 1/4 | ||||
Y54G2A.36.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.1:c.-321+465C>T | ||||
Intron_number | 1/4 | ||||
Y54G2A.36.5 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.5:c.-2926C>T | ||||
cDNA_position | 164 | ||||
Exon_number | 1/4 | ||||
Y54G2A.36.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.4:c.-249+465C>T | ||||
Intron_number | 1/5 | ||||
Y54G2A.36.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.3:c.-284+465C>T | ||||
Intron_number | 1/4 | ||||
Pseudogene | Y54G2A.20 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.20:n.1572G>A | ||||
cDNA_position | 1572 | ||||
Exon_number | 10/14 | ||||
Method | WGS_Flibotte |