WormBase Tree Display for Variation: WBVar01727094
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WBVar01727094 | Name | Public_name | WBVar01727094 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00425497 | |||||||
ZC416.8a.1:c.885C>T | ||||||||
ZC416.8b.1:c.1-1439C>T | ||||||||
CE17307:p.Ser295= | ||||||||
HGVSg | CHROMOSOME_IV:g.3619214G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | ZC416 | ||||
Flanking_sequences | CAACCAGCCAGGAGTGTCTGGCATCATTTC | GACATCCAGGTTGTGATGGTGGGCTCGAGG | ||||||
Mapping_target | ZC416 | |||||||
Source_location | 225 | CHROMOSOME_IV | 3619209 | 3619209 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006756 | ||||||
WBGene00000481 | ||||||||
Transcript | ZC416.8a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | ZC416.8a.1:c.885C>T | |||||||
HGVSp | CE17307:p.Ser295= | |||||||
cDNA_position | 967 | |||||||
CDS_position | 885 | |||||||
Protein_position | 295 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | tcC/tcT | |||||||
Amino_acid_change | S | |||||||
ZC416.8b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZC416.8b.1:c.1-1439C>T | |||||||
Intron_number | 1/11 | |||||||
Method | WGS_Flibotte |