WormBase Tree Display for Variation: WBVar01727818
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| WBVar01727818 | Name | Public_name | WBVar01727818 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00426289 | |||||||
| C11D2.6n.1:c.79+1735C>T | ||||||||
| C11D2.6j.1:c.25+1735C>T | ||||||||
| C11D2.6k.1:c.25+1735C>T | ||||||||
| C11D2.6l.1:c.25+1735C>T | ||||||||
| C11D2.6m.1:c.79+1735C>T | ||||||||
| C11D2.6i.1:c.25+1735C>T | ||||||||
| C11D2.6o.1:c.79+1735C>T | ||||||||
| C11D2.6p.1:c.79+1735C>T | ||||||||
| HGVSg | CHROMOSOME_IV:g.6177472G>A | |||||||
| Sequence_details | SMap | S_parent | Sequence | C11D2 | ||||
| Flanking_sequences | CATTTTTGTGGATGGAATGTATATTGAAAA | AAGCGCACAAAAAGTGGAATCGAATCGAAA | ||||||
| Mapping_target | C11D2 | |||||||
| Source_location | 225 | CHROMOSOME_IV | 6177461 | 6177461 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Substitution | G | A | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00006809 | ||||||
| Transcript | C11D2.6o.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6o.1:c.79+1735C>T | |||||||
| Intron_number | 2/28 | |||||||
| C11D2.6p.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6p.1:c.79+1735C>T | |||||||
| Intron_number | 2/28 | |||||||
| C11D2.6i.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6i.1:c.25+1735C>T | |||||||
| Intron_number | 1/28 | |||||||
| C11D2.6l.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6l.1:c.25+1735C>T | |||||||
| Intron_number | 1/27 | |||||||
| C11D2.6n.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6n.1:c.79+1735C>T | |||||||
| Intron_number | 2/27 | |||||||
| C11D2.6j.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6j.1:c.25+1735C>T | |||||||
| Intron_number | 1/26 | |||||||
| C11D2.6m.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6m.1:c.79+1735C>T | |||||||
| Intron_number | 2/29 | |||||||
| C11D2.6k.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | C11D2.6k.1:c.25+1735C>T | |||||||
| Intron_number | 1/27 | |||||||
| Method | WGS_Flibotte |
