WormBase Tree Display for Variation: WBVar01758974
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WBVar01758974 | Name | Public_name | WBVar01758974 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00458686 | |||||||
CE16058:p.Lys2001= | ||||||||
F47A4.2.1:c.6003G>A | ||||||||
HGVSg | CHROMOSOME_X:g.9815367C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F47A4 | ||||
Flanking_sequences | CAACATATCAAAACAGGTTTCGTAGATTAG | CTGAAAAAATTGTCATTGTCTAGGAAACAA | ||||||
Mapping_target | F47A4 | |||||||
Source_location | 225 | CHROMOSOME_X | 9815309 | 9815309 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001081 | ||||||
Transcript | F47A4.2.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F47A4.2.1:c.6003G>A | |||||||
HGVSp | CE16058:p.Lys2001= | |||||||
cDNA_position | 6106 | |||||||
CDS_position | 6003 | |||||||
Protein_position | 2001 | |||||||
Exon_number | 14/21 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |