WormBase Tree Display for Variation: WBVar01796445
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WBVar01796445 | Name | Public_name | WBVar01796445 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00498958 | |||||||
CE43918:p.Ser389= | ||||||||
F09E8.7b.1:c.1167G>A | ||||||||
F09E8.7a.1:c.1242G>A | ||||||||
CE24888:p.Ser414= | ||||||||
HGVSg | CHROMOSOME_IV:g.13175275C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F58D2 | ||||
Flanking_sequences | AATAGCATCGATTGCTCGTTGAGCTTCAGG | GACAGCTCATCATCCAGCTCATCACTTTGT | ||||||
Mapping_target | F58D2 | |||||||
Source_location | 225 | CHROMOSOME_IV | 13175251 | 13175251 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002974 | ||||||
Transcript | F09E8.7a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F09E8.7a.1:c.1242G>A | |||||||
HGVSp | CE24888:p.Ser414= | |||||||
cDNA_position | 1491 | |||||||
CDS_position | 1242 | |||||||
Protein_position | 414 | |||||||
Exon_number | 7/10 | |||||||
Codon_change | tcG/tcA | |||||||
Amino_acid_change | S | |||||||
F09E8.7b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F09E8.7b.1:c.1167G>A | |||||||
HGVSp | CE43918:p.Ser389= | |||||||
cDNA_position | 1341 | |||||||
CDS_position | 1167 | |||||||
Protein_position | 389 | |||||||
Exon_number | 8/11 | |||||||
Codon_change | tcG/tcA | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |