WormBase Tree Display for Variation: WBVar01820475
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WBVar01820475 | Name | Public_name | WBVar01820475 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00532132 | |||||||
F16F9.2.1:c.3015T>A | ||||||||
CE30956:p.Leu1005= | ||||||||
HGVSg | CHROMOSOME_X:g.8451999A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F16F9 | ||||
Flanking_sequences | CTGCGAAATTTGAGTGTTATTGATTTTACT | AGCAATTCTAAAGTGTTGATAGTAGTTTCT | ||||||
Mapping_target | F16F9 | |||||||
Source_location | 225 | CHROMOSOME_X | 8451946 | 8451946 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001068 | ||||||
Transcript | F16F9.2.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F16F9.2.1:c.3015T>A | |||||||
HGVSp | CE30956:p.Leu1005= | |||||||
cDNA_position | 3015 | |||||||
CDS_position | 3015 | |||||||
Protein_position | 1005 | |||||||
Exon_number | 6/9 | |||||||
Codon_change | ctT/ctA | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |