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WormBase Tree Display for Variation: WBVar01922212

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Name Class

WBVar01922212NamePublic_nameWBVar01922212
Other_namecewivar00640622
Y54G2A.11b.1:c.-1611_-1602del
Y54G2A.11a.1:c.1209+45_1209+54del
Y54G2A.11b.3:c.-16+45_-16+54del
Y54G2A.11b.2:c.-16+45_-16+54del
HGVSgCHROMOSOME_IV:g.2768111_2768120del
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGAATTCGAATTTTCTAATTAAACTTTGAAAAATTTTAATTTTTGTCGAATTTTGGGGGGT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV27681092768118From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000032From_analysisMillion_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022883From_analysisMillion_mutation_project_reanalysis
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00022902From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021876
TranscriptY54G2A.11b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.3:c.-16+45_-16+54del
Intron_number2/5
Y54G2A.11b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.1:c.-1611_-1602del
cDNA_position1311-1320
Exon_number4/7
Y54G2A.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11a.1:c.1209+45_1209+54del
Intron_number5/7
Y54G2A.11b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.2:c.-16+45_-16+54del
Intron_number3/6
MethodWGS_Flibotte