WormBase Tree Display for Variation: WBVar01939766
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WBVar01939766 | Name | Public_name | WBVar01939766 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00660642 | |||||||
T21C12.1k.1:c.238-17del | ||||||||
T21C12.1d.1:c.238-17del | ||||||||
T21C12.1f.1:c.238-17del | ||||||||
T21C12.1b.1:c.238-17del | ||||||||
T21C12.1j.1:c.238-17del | ||||||||
T21C12.1c.1:c.238-17del | ||||||||
T21C12.1e.1:c.238-17del | ||||||||
T21C12.1c.2:c.238-17del | ||||||||
HGVSg | CHROMOSOME_III:g.10522899del | |||||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | ||||
Flanking_sequences | GTGGGAGGACTGCACCATCTAATTTAACTC | TTTTTTTTCATTCCAGGACTTCACATTAGA | ||||||
Mapping_target | T21C12 | |||||||
Source_location | 225 | CHROMOSOME_III | 10522801 | 10522801 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006784 | ||||||
Transcript | T21C12.1k.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1k.1:c.238-17del | |||||||
Intron_number | 3/11 | |||||||
T21C12.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1c.1:c.238-17del | |||||||
Intron_number | 4/18 | |||||||
T21C12.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1e.1:c.238-17del | |||||||
Intron_number | 4/19 | |||||||
T21C12.1c.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1c.2:c.238-17del | |||||||
Intron_number | 4/14 | |||||||
T21C12.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1b.1:c.238-17del | |||||||
Intron_number | 4/14 | |||||||
T21C12.1j.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1j.1:c.238-17del | |||||||
Intron_number | 3/5 | |||||||
T21C12.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1d.1:c.238-17del | |||||||
Intron_number | 4/17 | |||||||
T21C12.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T21C12.1f.1:c.238-17del | |||||||
Intron_number | 4/11 | |||||||
Method | WGS_Flibotte |