WormBase Tree Display for Variation: WBVar01945875
expand all nodes | collapse all nodes | view schema
WBVar01945875 | Name | Public_name | WBVar01945875 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00667400 | |||||||
CE16058:p.Pro3343_Gln3344insProGlnGlnPro | ||||||||
F47A4.2.1:c.10025_10026insGCCACCACAGCA | ||||||||
HGVSg | CHROMOSOME_X:g.9811067_9811068insTGCTGTGGTGGC | |||||||
Sequence_details | SMap | S_parent | Sequence | F47A4 | ||||
Flanking_sequences | TGTTGTTGGGACACTTGTGGCTGCTGTGGT | TGCTGTGATTGCTGGCCTTGTTGACCAATT | ||||||
Mapping_target | F47A4 | |||||||
Source_location | 225 | CHROMOSOME_X | 9811009 | 9811010 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGCTGTGGTGGC | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001081 | ||||||
Transcript | F47A4.2.1 | VEP_consequence | inframe_insertion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F47A4.2.1:c.10025_10026insGCCACCACAGCA | |||||||
HGVSp | CE16058:p.Pro3343_Gln3344insProGlnGlnPro | |||||||
cDNA_position | 10128-10129 | |||||||
CDS_position | 10025-10026 | |||||||
Protein_position | 3342 | |||||||
Exon_number | 19/21 | |||||||
Codon_change | caa/caGCCACCACAGCAa | |||||||
Amino_acid_change | Q/QPPQQ | |||||||
Method | WGS_Flibotte |