WormBase Tree Display for Variation: WBVar01955105
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WBVar01955105 | Name | Public_name | WBVar01955105 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00677598 | |||||||
F54B11.3a.1:c.2171-9_2171-6del | ||||||||
F54B11.3b.1:c.2171-9_2171-6del | ||||||||
HGVSg | CHROMOSOME_X:g.13588135_13588138del | |||||||
Sequence_details | SMap | S_parent | Sequence | F54B11 | ||||
Flanking_sequences | ATTTTCAAACTATAAACTTAAATGGTGTTT | TTCAGATAACTTCATTTATGCACCAATCGC | ||||||
Mapping_target | F54B11 | |||||||
Source_location | 225 | CHROMOSOME_X | 13588065 | 13588068 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006816 | ||||||
Transcript | F54B11.3a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F54B11.3a.1:c.2171-9_2171-6del | |||||||
Intron_number | 7/11 | |||||||
F54B11.3b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F54B11.3b.1:c.2171-9_2171-6del | |||||||
Intron_number | 7/8 | |||||||
Method | WGS_Flibotte |