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WormBase Tree Display for Variation: WBVar01965561

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Name Class

WBVar01965561NamePublic_nameWBVar01965561
Other_namecewivar00691513
Y54G2A.17b.1:c.1611+30del
Y54G2A.17a.2:c.1551+30del
Y54G2A.17a.3:c.1551+30del
Y54G2A.17a.1:c.1551+30del
HGVSgCHROMOSOME_IV:g.2873199del
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTTCGCTGGAAATTTCGATTTTCAATCAAATTTTTTTCCTAAAAATATGGATTTTCCACC
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28731972873197From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1551+30del
Intron_number6/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1611+30del
Intron_number7/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1551+30del
Intron_number7/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1551+30del
Intron_number7/8
MethodWGS_Flibotte