WormBase Tree Display for Variation: WBVar02004941
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WBVar02004941 | Name | Public_name | WBVar02004941 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00732533 | |||||||
T28F12.2c.1:c.-1807+489del | ||||||||
T28F12.2a.1:c.123+489del | ||||||||
T28F12.2d.2:c.-1243+489del | ||||||||
T28F12.2d.1:c.-1225+489del | ||||||||
T28F12.2f.1:c.123+489del | ||||||||
HGVSg | CHROMOSOME_V:g.4498078del | |||||||
Sequence_details | SMap | S_parent | Sequence | T28F12 | ||||
Flanking_sequences | GGTCTCGCCACAGGAGCTAAATTCAACAGA | TTTTTTTCATTTGACATAGGAAAACAAATT | ||||||
Mapping_target | T28F12 | |||||||
Source_location | 225 | CHROMOSOME_V | 4498064 | 4498064 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006796 | ||||||
Transcript | T28F12.2c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2c.1:c.-1807+489del | |||||||
Intron_number | 1/10 | |||||||
T28F12.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2d.1:c.-1225+489del | |||||||
Intron_number | 1/11 | |||||||
T28F12.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2a.1:c.123+489del | |||||||
Intron_number | 2/11 | |||||||
T28F12.2d.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2d.2:c.-1243+489del | |||||||
Intron_number | 1/11 | |||||||
T28F12.2f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2f.1:c.123+489del | |||||||
Intron_number | 2/10 | |||||||
Method | WGS_Flibotte |