WormBase Tree Display for Variation: WBVar02004942
expand all nodes | collapse all nodes | view schema
WBVar02004942 | Name | Public_name | WBVar02004942 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00732534 | |||||||
T28F12.2f.1:c.123+711del | ||||||||
T28F12.2d.2:c.-1243+711del | ||||||||
T28F12.2c.1:c.-1807+711del | ||||||||
T28F12.2d.1:c.-1225+711del | ||||||||
T28F12.2a.1:c.123+711del | ||||||||
HGVSg | CHROMOSOME_V:g.4498300del | |||||||
Sequence_details | SMap | S_parent | Sequence | T28F12 | ||||
Flanking_sequences | TTCCGTTCAAACTTTTGCCAAATTGCCAAA | TTTTGAAAAATATGAGCTTTCGAGGAAATC | ||||||
Mapping_target | T28F12 | |||||||
Source_location | 225 | CHROMOSOME_V | 4498286 | 4498286 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006796 | ||||||
Transcript | T28F12.2c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2c.1:c.-1807+711del | |||||||
Intron_number | 1/10 | |||||||
T28F12.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2d.1:c.-1225+711del | |||||||
Intron_number | 1/11 | |||||||
T28F12.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2a.1:c.123+711del | |||||||
Intron_number | 2/11 | |||||||
T28F12.2d.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2d.2:c.-1243+711del | |||||||
Intron_number | 1/11 | |||||||
T28F12.2f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T28F12.2f.1:c.123+711del | |||||||
Intron_number | 2/10 | |||||||
Method | WGS_Flibotte |