WormBase Tree Display for Variation: WBVar02046045
expand all nodes | collapse all nodes | view schema
WBVar02046045 | Name | Public_name | WBVar02046045 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00775179 | |||||||
CE48425:p.Leu37_Tyr38del | ||||||||
R13A1.3.1:c.109_114del | ||||||||
R13A1.3.2:c.109_114del | ||||||||
HGVSg | CHROMOSOME_IV:g.7204283_7204288del | |||||||
Sequence_details | SMap | S_parent | Sequence | R13A1 | ||||
Flanking_sequences | GTTCGAATTTCCATTCGTGACATTCATGGA | TGGACTGGATTTTGGACGATTTTGAACACA | ||||||
Mapping_target | R13A1 | |||||||
Source_location | 225 | CHROMOSOME_IV | 7204271 | 7204276 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020042 | ||||||
Transcript | R13A1.3.2 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | R13A1.3.2:c.109_114del | |||||||
HGVSp | CE48425:p.Leu37_Tyr38del | |||||||
cDNA_position | 123-128 | |||||||
CDS_position | 109-114 | |||||||
Protein_position | 37-38 | |||||||
Exon_number | 2/6 | |||||||
Codon_change | CTCTAT/- | |||||||
Amino_acid_change | LY/- | |||||||
R13A1.3.1 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | R13A1.3.1:c.109_114del | |||||||
HGVSp | CE48425:p.Leu37_Tyr38del | |||||||
cDNA_position | 225-230 | |||||||
CDS_position | 109-114 | |||||||
Protein_position | 37-38 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | CTCTAT/- | |||||||
Amino_acid_change | LY/- | |||||||
Method | WGS_Flibotte |