WormBase Tree Display for Variation: WBVar02048226
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WBVar02048226 | Name | Public_name | WBVar02048226 | ||
---|---|---|---|---|---|
Other_name | cewivar00777390 | ||||
Y54G2A.36.1:c.-396_-370del | |||||
Y54G2A.36.3:c.-359_-333del | |||||
Y54G2A.36.4:c.-324_-298del | |||||
Y54G2A.36.2:c.-370_-344del | |||||
Y54G2A.20:n.1830-195_1830-169del | |||||
HGVSg | CHROMOSOME_IV:g.2897727_2897753del | ||||
Sequence_details (6) | |||||
Variation_type | Natural_variant | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||
Laboratory | VC | ||||
Analysis | Million_mutation_project_reanalysis | ||||
Status | Live | ||||
Affects | Gene | WBGene00021898 | |||
WBGene00021885 | |||||
Transcript | Y54G2A.36.2 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.2:c.-370_-344del | ||||
cDNA_position | 32-58 | ||||
Exon_number | 1/5 | ||||
Y54G2A.36.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.1:c.-396_-370del | ||||
cDNA_position | 32-58 | ||||
Exon_number | 1/5 | ||||
Y54G2A.36.4 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.4:c.-324_-298del | ||||
cDNA_position | 34-60 | ||||
Exon_number | 1/6 | ||||
Y54G2A.36.3 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.36.3:c.-359_-333del | ||||
cDNA_position | 34-60 | ||||
Exon_number | 1/5 | ||||
Pseudogene | Y54G2A.20 | VEP_consequence | intron_variant,non_coding_transcript_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.20:n.1830-195_1830-169del | ||||
Intron_number | 11/13 | ||||
Method | WGS_Flibotte |