WormBase Tree Display for Variation: WBVar02082242
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| WBVar02082242 | Name | Public_name | WBVar02082242 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00811874 | |||||||
| Y54G2A.17a.1:c.1368+3_1368+28delinsTAATTTGATGGCAAAAAAAGAACG | ||||||||
| Y54G2A.17b.1:c.1428+3_1428+28delinsTAATTTGATGGCAAAAAAAGAACG | ||||||||
| Y54G2A.17a.3:c.1368+3_1368+28delinsTAATTTGATGGCAAAAAAAGAACG | ||||||||
| Y54G2A.17a.2:c.1368+3_1368+28delinsTAATTTGATGGCAAAAAAAGAACG | ||||||||
| HGVSg | CHROMOSOME_IV:g.2875167_2875192delinsCGTTCTTTTTTTGCCATCAAATTA | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
| Flanking_sequences | ATTTCTTCAAAATTCTCGGAATTTTTTCGT | ACCTCAAACGGATGCCTGCAAAGAATCTGT | ||||||
| Mapping_target | Y54G2A | |||||||
| Source_location | 225 | CHROMOSOME_IV | 2875165 | 2875190 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | CGTTCTTTTTTTGCCATCAAATTA | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00021882 | ||||||
| Transcript | Y54G2A.17a.3 | VEP_consequence | splice_region_variant,intron_variant | |||||
| VEP_impact | LOW | |||||||
| HGVSc | Y54G2A.17a.3:c.1368+3_1368+28delinsTAATTTGATGGCAAAAAAAGAACG | |||||||
| Intron_number | 5/7 | |||||||
| Y54G2A.17b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | Y54G2A.17b.1:c.1428+3_1428+28delinsTAATTTGATGGCAAAAAAAGAACG | |||||||
| Intron_number | 6/7 | |||||||
| Y54G2A.17a.2 | VEP_consequence | splice_region_variant,intron_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | Y54G2A.17a.2:c.1368+3_1368+28delinsTAATTTGATGGCAAAAAAAGAACG | |||||||
| Intron_number | 6/8 | |||||||
| Y54G2A.17a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | Y54G2A.17a.1:c.1368+3_1368+28delinsTAATTTGATGGCAAAAAAAGAACG | |||||||
| Intron_number | 6/8 | |||||||
| Method | WGS_Flibotte |
