WormBase Tree Display for Variation: WBVar02082243
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| WBVar02082243 | Name | Public_name | WBVar02082243 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00811875 | |||||||
| Y54G2A.17a.1:c.1180-1628_1180-1590delinsTTGAATACAGCAAGCAT | ||||||||
| Y54G2A.17b.1:c.1240-1628_1240-1590delinsTTGAATACAGCAAGCAT | ||||||||
| Y54G2A.17a.3:c.1180-1628_1180-1590delinsTTGAATACAGCAAGCAT | ||||||||
| Y54G2A.17a.2:c.1180-1628_1180-1590delinsTTGAATACAGCAAGCAT | ||||||||
| HGVSg | CHROMOSOME_IV:g.2876973_2877011delinsATGCTTGCTGTATTCAA | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
| Flanking_sequences | TATTCAAAAAATATTATTTTTTCAAAAAAA | ATTTAGTTTCCTTCAGTTTTATGCTTCGAA | ||||||
| Mapping_target | Y54G2A | |||||||
| Source_location | 225 | CHROMOSOME_IV | 2876971 | 2877009 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | ATGCTTGCTGTATTCAA | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00021882 | ||||||
| Transcript | Y54G2A.17a.3 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.17a.3:c.1180-1628_1180-1590delinsTTGAATACAGCAAGCAT | |||||||
| Intron_number | 4/7 | |||||||
| Y54G2A.17b.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.17b.1:c.1240-1628_1240-1590delinsTTGAATACAGCAAGCAT | |||||||
| Intron_number | 5/7 | |||||||
| Y54G2A.17a.2 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.17a.2:c.1180-1628_1180-1590delinsTTGAATACAGCAAGCAT | |||||||
| Intron_number | 5/8 | |||||||
| Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y54G2A.17a.1:c.1180-1628_1180-1590delinsTTGAATACAGCAAGCAT | |||||||
| Intron_number | 5/8 | |||||||
| Method | WGS_Flibotte |
