WormBase Tree Display for Variation: WBVar02103513
expand all nodes | collapse all nodes | view schema
WBVar02103513 | Name | Public_name | WBVar02103513 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00833822 | |||||||
Y54G2A.14.1:c.454+41_454+59delinsATATGTCGTATTACGTAGACG | ||||||||
Y54G2A.14.2:c.454+41_454+59delinsATATGTCGTATTACGTAGACG | ||||||||
HGVSg | CHROMOSOME_IV:g.2839949_2839967delinsCGTCTACGTAATACGACATAT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CAAGACATGACGAAATTTTTCATGTTTACA | ATATATATAGCTTAACTACAAGACAACCCA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2839947 | 2839965 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CGTCTACGTAATACGACATAT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021879 | ||||||
Transcript | Y54G2A.14.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.14.1:c.454+41_454+59delinsATATGTCGTATTACGTAGACG | |||||||
Intron_number | 3/4 | |||||||
Y54G2A.14.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.14.2:c.454+41_454+59delinsATATGTCGTATTACGTAGACG | |||||||
Intron_number | 4/5 | |||||||
Method | WGS_Flibotte |