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WormBase Tree Display for Variation: WBVar02112290

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Name Class

WBVar02112290NamePublic_nameWBVar02112290
Other_namecewivar00842905
Y54G2A.17a.3:c.830-133_830-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
Y54G2A.17a.2:c.830-133_830-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
Y54G2A.17a.1:c.830-133_830-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
Y54G2A.17b.1:c.890-133_890-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
HGVSgCHROMOSOME_IV:g.2879617_2879744delinsTGTTTTTTATTTGATAAAATTTCGAAAAAAGCACATTATTTCAGGTGCG
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGTGTCTATTAGAGCGAGGAATGTATCTGGAGTTGTATATACTCAGTTTTCACCAATTTTT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28796152879742From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionTGTTTTTTATTTGATAAAATTTCGAAAAAAGCACATTATTTCAGGTGCG
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022883From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.830-133_830-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
Intron_number3/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.890-133_890-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
Intron_number4/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.830-133_830-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
Intron_number4/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.830-133_830-6delinsCGCACCTGAAATAATGTGCTTTTTTCGAAATTTTATCAAATAAAAAACA
Intron_number4/8
MethodWGS_Flibotte