WormBase Tree Display for Variation: WBVar02118305
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WBVar02118305 | Name | Public_name | WBVar02118305 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00849133 | |||||||
Y54G2A.17a.2:c.1368+850_1368+873delinsGTTTTATTTATAAAAATTATTACGTA | ||||||||
Y54G2A.17a.3:c.1368+850_1368+873delinsGTTTTATTTATAAAAATTATTACGTA | ||||||||
Y54G2A.17a.1:c.1368+850_1368+873delinsGTTTTATTTATAAAAATTATTACGTA | ||||||||
Y54G2A.17b.1:c.1428+850_1428+873delinsGTTTTATTTATAAAAATTATTACGTA | ||||||||
HGVSg | CHROMOSOME_IV:g.2874322_2874345delinsTACGTAATAATTTTTATAAATAAAAC | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TAGTAAAATTCAAACTCTTATTGCTATTTT | TGTAAATTTATTAATTAGAAATATTTAAAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2874320 | 2874343 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TACGTAATAATTTTTATAAATAAAAC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.3:c.1368+850_1368+873delinsGTTTTATTTATAAAAATTATTACGTA | |||||||
Intron_number | 5/7 | |||||||
Y54G2A.17b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17b.1:c.1428+850_1428+873delinsGTTTTATTTATAAAAATTATTACGTA | |||||||
Intron_number | 6/7 | |||||||
Y54G2A.17a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.1368+850_1368+873delinsGTTTTATTTATAAAAATTATTACGTA | |||||||
Intron_number | 6/8 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.1368+850_1368+873delinsGTTTTATTTATAAAAATTATTACGTA | |||||||
Intron_number | 6/8 | |||||||
Method | WGS_Flibotte |