WormBase Tree Display for Variation: WBVar02120839

WBVar02120839 Name: Public_name: WBVar02120839
    Other_name: cewivar00851762
    HGVSg: CHROMOSOME_III:g.2078011_2088010del
  Sequence_details: SMap: S_parent: Sequence: CHROMOSOME_III
    Flanking_sequences: TTGTTTTTTTGTGCCTACATATACCTGTTGAAATTGGAATTCAAGACAAAAACCCCTGTAGCGCGTCTGAAAATGGATATCTAGGTACAAAAACTTACCAATAATATTTTAAAACAATCTAGAATCCAAATCTATCAAAACATTTCCGGAATTCCATAATGTTTATTTTTGTTTTTTTGTGCCTACATATACCTGTTGAA TGACAAACTCCATTGCCGAGGACACCTCTG
    Mapping_target: CHROMOSOME_III
    Source_location: 225 CHROMOSOME_III 2078001 2088000 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00021703
    Transcript: Y48G9A.10.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-1948
        CDS_position: ?-1942
        Protein_position: ?-648
        Intron_number: 2-7/8
        Exon_number: 1-8/9
  Remark: The boundaries of this variant have been identified only approximately
    This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
  Method: WGS_Flibotte