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WormBase Tree Display for Variation: WBVar02121406

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Name Class

WBVar02121406NamePublic_nameWBVar02121406
Other_namecewivar00852329
Sequence_detailsSMapS_parentSequenceCHROMOSOME_III
Flanking_sequencesGTTCAGCATATTCTGAAAATAAGTCAAATATTTCGCTGAAGTTTTCATGAAAATTTCGGT
Mapping_targetCHROMOSOME_III
Source_location225CHROMOSOME_III13480011413000From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGene (23)
TranscriptY82E9BR.25.1
Y82E9BR.8.1
Y82E9BR.32.1
Y82E9BR.10.1
Y82E9BR.5.2
Y82E9BR.12.2
Y82E9BR.21.2
Y82E9BL.3.1
Y82E9BL.1.1
Y82E9BR.31
Y82E9BR.20.1
Y82E9BR.6.2
Y82E9BR.5.1
Y82E9BR.22.1
Y82E9BR.24
Y82E9BL.4.1
Y82E9BR.13.1
Y82E9BR.4.1
Y82E9BR.14.1
Y82E9BR.11.1
Y82E9BR.23a.1
Y82E9BR.12.1
Y82E9BR.21.1
Y82E9BR.5.3
Y82E9BR.9.1
Y82E9BR.6.1
Y82E9BR.23b.1
PseudogeneY82E9BL.2
Y82E9BR.7
RemarkThe boundaries of this variant have been identified only approximately
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
MethodWGS_Flibotte