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WormBase Tree Display for Variation: WBVar02122117

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Name Class

WBVar02122117NamePublic_nameWBVar02122117
Other_namecewivar00853040
Sequence_detailsSMapS_parentSequenceCHROMOSOME_III
Flanking_sequencesGTTCAGCATATTCTGAAAATAAGTCAAATAAAAAGCTGTATTTTTCAAAAATTCAAAAGTACCTGAAAATCATATGGAGTCATTCTTTTTTATTTTATAAAACTGTTTAGCAGTGTCAAATATACCAGAAAATACCAGAAAAAGTATGTTAGCTTGTACGGAAGTTTATTTTAAAAAATGCAGAATTTAATAAAAAGCTGTATTTTTCAAAAATTCAAAAGTACCTGAAAATCATATGGA
Mapping_targetCHROMOSOME_III
Source_location225CHROMOSOME_III13480011366000From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00022321
WBGene00022318
WBGene00022340
WBGene00022320
WBGene00022319
WBGene00022341
WBGene00022342
TranscriptY82E9BL.1.1
Y82E9BL.3.1
Y82E9BR.8.1
Y82E9BR.9.1
Y82E9BL.4.1
PseudogeneY82E9BL.2
Y82E9BR.7
RemarkThe boundaries of this variant have been identified only approximately
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
MethodWGS_Flibotte