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WormBase Tree Display for Variation: WBVar02122819

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Name Class

WBVar02122819NamePublic_nameWBVar02122819
Other_namecewivar00853742
Sequence_detailsSMapS_parentSequenceCHROMOSOME_III
Flanking_sequencesTCTATTCTGACTCAAATCTAGAATTTTTAACTCCTTGTGACATTCCTGCTGACGGAGACGTATACACTTGTCCTGGACGGATTGGCTTCACAATTTGTGGAGCATTCATTCGTCGCATGTTACGTTGTCGAACAGCTTCCTTGATTCGTTCAACTTCTTGTTGATACTTCTTTCGTTCTGCTTGACTACGTTGCTTCGAATCACGAAGAGCAGTTTCTAATATTTTGATGCGATCTTCACGACCACGAAGACGAGCTTCCATCTTTGGCAGTTCAACGCGCAAATCGGCATTGTCGCGAACAAGCTGAAAATTCAAGTTTTAAGATAATCAAAATGAGAATAAAAACGACAAACCTGCTTGTGAACCTTCGTCAACTTGTCCAAATTGTTCTCCAAGAACTGAATTCGTTGCTTTTGAGCTGGTCCACTGAGAGAATCTTCTCCCTCGGTGTCTTGATTGGCTTGGCATCGAGCAACAAGTACTCTCATGAACTCCTTTTTCAAATTCTTCAACGTTGTA
Mapping_targetCHROMOSOME_III
Source_location225CHROMOSOME_III83300018352000From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGene (14)
TranscriptZC262.4.2
ZC262.8.1
ZC262.5.1
ZC262.4.1
ZC262.10.1
R05D3.7.1
ZC262.11.1
R05D3.6.1
ZC262.2b.5
ZC262.2b.3
ZC262.2b.4
ZC262.2b.1
ZC262.7.1
ZC262.12.1
ZC262.2b.2
ZC262.2a.2
ZC262.2a.1
ZC262.3.1
ZC262.9.1
ZC262.3.2
PseudogeneZC262.1
R05D3.5
RemarkThe boundaries of this variant have been identified only approximately
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
MethodWGS_Flibotte