WormBase Tree Display for Variation: WBVar02125331
expand all nodes | collapse all nodes | view schema
| WBVar02125331 | Evidence | Paper_evidence | WBPaper00044453 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | n2609 | |||||
| Other_name (14) | |||||||
| HGVSg | CHROMOSOME_I:g.7424966C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | C44E1 | |||
| Flanking_sequences | gaattcaactcgtacgtgacggtgaagctg | agactgtaaaatcaacaactgtggctgtgc | |||||
| Mapping_target | C44E1 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00044453 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | MT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006752 | |||||
| Transcript | ZK524.2f.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK524.2f.1:c.136C>T | ||||||
| HGVSp | CE43866:p.Gln46Ter | ||||||
| cDNA_position | 136 | ||||||
| CDS_position | 136 | ||||||
| Protein_position | 46 | ||||||
| Exon_number | 3/30 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| ZK524.2j.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK524.2j.1:c.91C>T | ||||||
| HGVSp | CE51718:p.Gln31Ter | ||||||
| cDNA_position | 91 | ||||||
| CDS_position | 91 | ||||||
| Protein_position | 31 | ||||||
| Exon_number | 3/29 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| ZK524.2k.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK524.2k.1:c.91C>T | ||||||
| HGVSp | CE51726:p.Gln31Ter | ||||||
| cDNA_position | 91 | ||||||
| CDS_position | 91 | ||||||
| Protein_position | 31 | ||||||
| Exon_number | 3/29 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| ZK524.2i.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK524.2i.1:c.136C>T | ||||||
| HGVSp | CE32552:p.Gln46Ter | ||||||
| cDNA_position | 136 | ||||||
| CDS_position | 136 | ||||||
| Protein_position | 46 | ||||||
| Exon_number | 3/29 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| ZK524.2a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK524.2a.1:c.136C>T | ||||||
| HGVSp | CE15371:p.Gln46Ter | ||||||
| cDNA_position | 136 | ||||||
| CDS_position | 136 | ||||||
| Protein_position | 46 | ||||||
| Exon_number | 3/30 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| ZK524.2e.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK524.2e.1:c.136C>T | ||||||
| HGVSp | CE34626:p.Gln46Ter | ||||||
| cDNA_position | 136 | ||||||
| CDS_position | 136 | ||||||
| Protein_position | 46 | ||||||
| Exon_number | 3/30 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| ZK524.2d.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK524.2d.1:c.136C>T | ||||||
| HGVSp | CE34625:p.Gln46Ter | ||||||
| cDNA_position | 136 | ||||||
| CDS_position | 136 | ||||||
| Protein_position | 46 | ||||||
| Exon_number | 3/31 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | I | 2.07163 | ||||
| Reference | WBPaper00044453 | ||||||
| Method | Substitution_allele |
