WormBase Tree Display for Variation: WBVar02125817
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| WBVar02125817 | Evidence | Paper_evidence | WBPaper00003628 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | n1538 | |||||
| Other_name | CE28236:p.Trp1042Ter | ||||||
| F54B11.3a.1:c.3125_3126delinsAA | |||||||
| HGVSg | CHROMOSOME_X:g.13589225_13589226delinsAA | ||||||
| Sequence_details | SMap | S_parent | Sequence | F54B11 | |||
| Flanking_sequences | ggtcgagtgctccaaagggagtcctcgttt | gcttacaagcagattgacgacctgaactcg | |||||
| Mapping_target | F54B11 | ||||||
| Type_of_mutation | Substitution | gg | rr | Paper_evidence | WBPaper00003628 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | MT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006816 | |||||
| Transcript | F54B11.3a.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F54B11.3a.1:c.3125_3126delinsAA | ||||||
| HGVSp | CE28236:p.Trp1042Ter | ||||||
| cDNA_position | 3130-3131 | ||||||
| CDS_position | 3125-3126 | ||||||
| Protein_position | 1042 | ||||||
| Exon_number | 10/12 | ||||||
| Codon_change | tGG/tAA | ||||||
| Amino_acid_change | W/* | ||||||
| Genetics | Interpolated_map_position | X | 13.7653 | ||||
| Reference | WBPaper00003628 | ||||||
| Method | Substitution_allele |
