WormBase Tree Display for Variation: WBVar02130179

WBVar02130179 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h6361
    Other_name: C52E12.2a.1:c.1395C>T
      CE47855:p.Pro465=
      C52E12.2b.1:c.1395C>T
      C52E12.2a.2:c.1395C>T
      CE48050:p.Pro465=
    HGVSg: CHROMOSOME_II:g.7002892C>T
  Sequence_details: SMap: S_parent: Sequence: C52E12
    Flanking_sequences: ATGGAACAACATTAGGCGTATTTAGTCCAAAGAAGTTACC CATTTAGTTAACTTGAATGAAGATCCATTGATGTCAGAGT
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 7002831 7002831
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023689
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00006831
    Transcript: C52E12.2a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C52E12.2a.2:c.1395C>T
        HGVSp: CE48050:p.Pro465=
        cDNA_position: 1397
        CDS_position: 1395
        Protein_position: 465
        Exon_number: 8/24
        Codon_change: ccC/ccT
        Amino_acid_change: P
      C52E12.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C52E12.2b.1:c.1395C>T
        HGVSp: CE47855:p.Pro465=
        cDNA_position: 1595
        CDS_position: 1395
        Protein_position: 465
        Exon_number: 8/25
        Codon_change: ccC/ccT
        Amino_acid_change: P
      C52E12.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C52E12.2a.1:c.1395C>T
        HGVSp: CE48050:p.Pro465=
        cDNA_position: 1531
        CDS_position: 1395
        Protein_position: 465
        Exon_number: 8/24
        Codon_change: ccC/ccT
        Amino_acid_change: P
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose