WormBase Tree Display for Variation: WBVar02130182

WBVar02130182 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h8754
    Other_name: C52E12.2b.1:c.*330T>A
      C52E12.2a.2:c.*330T>A
      C52E12.2a.1:c.*330T>A
    HGVSg: CHROMOSOME_II:g.7010539T>A
  Sequence_details: SMap: S_parent: Sequence: C52E12
    Flanking_sequences: AAAATATTGTTTTTTAAAATGTTTCCTTCAAAGAGTTTTT AAAATTTTTTTTGCTTTGCTTTTATGTTTACAAAGGCCAA
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 7010478 7010478
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023674
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00006831
    Transcript: C52E12.2a.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2a.2:c.*330T>A
        cDNA_position: 5087
        Exon_number: 24/24
      C52E12.2b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2b.1:c.*330T>A
        cDNA_position: 5417
        Exon_number: 25/25
      C52E12.2a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2a.1:c.*330T>A
        cDNA_position: 5221
        Exon_number: 24/24
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose