WormBase Tree Display for Variation: WBVar02132662

WBVar02132662 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h16332
    Other_name: T21C12.1d.1:c.562+1665G>A
      T21C12.1c.1:c.562+1665G>A
      T21C12.1m.1:c.58+1665G>A
      T21C12.1o.1:c.58+1665G>A
      T21C12.1e.1:c.562+1665G>A
      T21C12.1k.1:c.562+1665G>A
      T21C12.1b.1:c.943+49G>A
      T21C12.1l.1:c.439+49G>A
      T21C12.1c.2:c.562+1665G>A
      T21C12.1f.1:c.562+1665G>A
    HGVSg: CHROMOSOME_III:g.10525990G>A
  Sequence_details: SMap: S_parent: Sequence: T21C12
    Flanking_sequences: ATCACTGTTTCTTGATCCTCATTTCTCACACCTCACGTGC TGGGGGTCCTTTTGGTATATATTCGACAAATTGTTGCAAT
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 10525875 10525875
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023752
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00006784
    Transcript: T21C12.1l.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1l.1:c.439+49G>A
        Intron_number: 4/8
      T21C12.1k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1k.1:c.562+1665G>A
        Intron_number: 5/11
      T21C12.1m.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1m.1:c.58+1665G>A
        Intron_number: 1/8
      T21C12.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1c.1:c.562+1665G>A
        Intron_number: 6/18
      T21C12.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1e.1:c.562+1665G>A
        Intron_number: 6/19
      T21C12.1c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1c.2:c.562+1665G>A
        Intron_number: 6/14
      T21C12.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1b.1:c.943+49G>A
        Intron_number: 9/14
      T21C12.1o.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1o.1:c.58+1665G>A
        Intron_number: 1/5
      T21C12.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1d.1:c.562+1665G>A
        Intron_number: 6/17
      T21C12.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1f.1:c.562+1665G>A
        Intron_number: 6/11
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose