WormBase Tree Display for Variation: WBVar02133504

WBVar02133504 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h16670
    Other_name: CE29123:p.Lys54=
      Y54G2A.32.1:c.162G>A
      Y54G2A.32.2:c.162G>A
    HGVSg: CHROMOSOME_IV:g.2804223G>A
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: AGCTAACTACCAATGTGAATAAACAAACCACAATAGCCAA GCAAAGACTGCAGTGAAGAATTGGGTGCCGAAGAATTGGG
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 2804220 2804220
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023759
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00021894
    Transcript: Y54G2A.32.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y54G2A.32.2:c.162G>A
        HGVSp: CE29123:p.Lys54=
        cDNA_position: 180
        CDS_position: 162
        Protein_position: 54
        Exon_number: 4/8
        Codon_change: aaG/aaA
        Amino_acid_change: K
      Y54G2A.32.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y54G2A.32.1:c.162G>A
        HGVSp: CE29123:p.Lys54=
        cDNA_position: 162
        CDS_position: 162
        Protein_position: 54
        Exon_number: 2/6
        Codon_change: aaG/aaA
        Amino_acid_change: K
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose